euL1db
The European database of L1-HS retrotransposon insertions in humans

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Previous EXPORT


   Click to select columns
  • id
  • srip_id
  • study_id
  • integrity
  • chromosome
  • genomic_start
  • genomic_stop
  • genomic_strand
  • reference_start
  • reference_stop
  • pcr_results
  • class
  • family
  • sub_family
  • sub_group
  • tsd_del_size
  • tsd_del_sequence
  • inversion_detected
  • inversion_start
  • inversion_stop
  • polya_size
  • lineage
  • method_id
  • pcr_5_junction
  • pcr_3_junction
  • forward_primer
  • reverse_primer
  • allele_frequency
  • transduction_5p_detected
  • transduction_5p_coordinates
  • transduction_5p_source
  • transduction_3p_detected
  • transduction_3p_coordinates
  • transduction_3p_source
  • l1_activity
  • sample_id
  • gene_name
  • reference_l1hs
  • mrip_id
  • sequence
  • comments

11 SRIP in this sample from selected study
SRIP ID Chromosome Start Stop Strand Sub group Lineage PCR Reference SampleID GeneName
srip23522 chr12 72707637 72707637 - L1-Ta germline . no 257 TRHDE
srip30224 chr13 71755828 71755828 . L1-Ta germline . no 257 .
srip60689 chr2 186064694 186064694 - L1-Ta germline . no 257 .
srip65575 chr21 15175023 15175023 + L1-Ta germline . no 257 .
srip84632 chr4 46895704 46895704 + L1-Ta germline . no 257 .
srip90876 chr4 122794031 122794031 - L1-Ta germline . no 257 .
srip98412 chr5 41707784 41707784 + L1-Ta germline . no 257 .
srip100116 chr5 85386203 85386203 + L1-Ta germline . no 257 .
srip127627 chr8 77675529 77675529 + unknown germline . no 257 ZFHX4
srip132409 chr9 30627775 30627775 + L1-Ta germline . no 257 .
srip140480 chrX 114814704 114814704 - L1-pre-Ta germline . no 257 PLS3